Topics / #bioinformatics

Bioinformatics projects on GitHub

Computational tools and courses for analyzing biological and genomic data.

As of , the most-starred Bioinformatics projects on GitHub are cs-video-courses (83.7K stars), scientific-agent-skills (51.7K stars) and knowledge-work-plugins (30K stars). GitHub.Locker tracks 10 Bioinformatics repositories with 245.3K stars combined. The fastest-growing on October 16 was scientific-agent-skills, with +929 stars in a day.

10Projects
245.3KStars in total
+1.2KStars in a day
Browse in the catalog →github.com/topics/bioinformatics ↗

Hot right now

Most stars gained in a day · Oct 16

+929

scientific-agent-skills

K-Dense-AI/scientific-agent-skills · ★ 51.7K

Scientific Agent Skills is a library of 163 ready-to-use scientific and research skills that plug into any AI agent supporting the open Agent Skills standard, turning that agent into a research assistant for biology, chemistry, medicine, physics, and more.

+182

open-science

aipoch/open-science · ★ 5.2K

AIPOCH Open-Science is an open-source, local-first, model-agnostic AI research workbench that runs scientific AI agents to help with literature review, data analysis, code execution, and producing traceable research reports, tables, and figures.

+92

knowledge-work-plugins

anthropics/knowledge-work-plugins · ★ 30K

An open-source collection of 11 Anthropic plugins that turn Claude into a specialist for knowledge-work roles — sales, finance, legal, marketing, data and more — built for Claude Cowork and also compatible with Claude Code.

+22

openscience

synthetic-sciences/openscience · ★ 4K

OpenScience is an open-source AI workbench for scientific research: give it a goal and it reads literature, writes and runs code, runs experiments, and writes up what it found.

The all-time top

10 projects · by stars

  1. #1 · Developer-Y/cs-video-courses

    cs-video-courses

    A curated list of university-level Computer Science courses that have publicly available video lectures, covering topics from intro programming to machine learning, security, robotics, and more.

    83.7K
  2. #2 · K-Dense-AI/scientific-agent-skills

    scientific-agent-skills

    Scientific Agent Skills is a library of 163 ready-to-use scientific and research skills that plug into any AI agent supporting the open Agent Skills standard, turning that agent into a research assistant for biology, chemistry, medicine, physics, and more.

    51.7K
  3. #3 · anthropics/knowledge-work-plugins

    knowledge-work-plugins

    An open-source collection of 11 Anthropic plugins that turn Claude into a specialist for knowledge-work roles — sales, finance, legal, marketing, data and more — built for Claude Cowork and also compatible with Claude Code.

    30K
  1. 4

    dash

    24.5Kplotly/dash · Python

    Dash is an open-source Python framework for building ML and data science web apps: interactive dashboards and data apps where dropdowns, sliders and graphs are wired directly into your analytical Python code, with no JavaScript required.

  2. 5

    alphafold

    14.9Kgoogle-deepmind/alphafold · Python

    AlphaFold is Google DeepMind's open source implementation of the AlphaFold v2 inference pipeline, which predicts 3D protein structures from amino acid sequences, plus a work-in-progress AlphaFold-Multimer model for protein complexes.

  3. 6

    cytoscape.js

    11.2Kcytoscape/cytoscape.js · JavaScript

    Cytoscape.js is a graph theory (network) library for modeling, visualizing, and analyzing relational data such as biological networks or social networks, usable in the browser or in Node.js.

  4. 7

    tpot

    10.1KEpistasisLab/tpot · Jupyter Notebook

    TPOT, the Tree-based Pipeline Optimization Tool, is a Python AutoML library that uses genetic programming to automatically optimize machine learning pipelines for your data; the README calls it your Data Science Assistant.

  5. 8

    feynman

    10KCompanion-Inc/feynman · TypeScript

    An open source AI research agent: a terminal app that searches papers, runs literature reviews and deep-research workflows, and links every claim back to its sources.

  6. 9

    open-science

    5.2Kaipoch/open-science · TypeScript

    AIPOCH Open-Science is an open-source, local-first, model-agnostic AI research workbench that runs scientific AI agents to help with literature review, data analysis, code execution, and producing traceable research reports, tables, and figures.

  7. 10

    openscience

    4Ksynthetic-sciences/openscience · TypeScript

    OpenScience is an open-source AI workbench for scientific research: give it a goal and it reads literature, writes and runs code, runs experiments, and writes up what it found.

Often tagged together